Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AC006486.2-201ENST00000624246 2199 ntBASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 AL161772.1-201ENST00000610494 4412 ntBASIC12.5□□□□□ -0.41
NUP35Q8NFH5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NUP35Q8NFH5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 AL391807.1-203ENST00000604392 2365 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 AC009336.1-201ENST00000608941 1553 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 KRT8P10-201ENST00000450021 1447 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 UNC93B2-201ENST00000285383 730 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ABHD17AP1-201ENST00000358206 933 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ECEL1P2-202ENST00000465689 757 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 AC034232.1-201ENST00000506026 1064 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 C2orf69P3-201ENST00000565542 1120 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SSR4P1-203ENST00000599569 2260 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 MIR600HG-201ENST00000449175 5984 ntBASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NUP35Q8NFH5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms