Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC010507.1-201ENST00000633895 436 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MADD-208ENST00000405573 1823 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 RPS15P9-201ENST00000494093 319 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC109635.5-201ENST00000533593 962 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC093028.1-201ENST00000622998 982 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC135050.7-201ENST00000624508 2218 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 BAD-202ENST00000394531 631 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 UGT1A2P-201ENST00000454886 866 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 Z92544.3-201ENST00000624747 417 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 BICD1-207ENST00000551848 1962 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 AC239800.4-201ENST00000603712 296 ntBASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNE1Q8NF91 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 TFAMP1-201ENST00000412727 736 ntBASIC5.17□□□□□ -1.58
SYNE1Q8NF91 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE1Q8NF91 NOC2LP1-202ENST00000452600 2235 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms