Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.94■□□□□ 0.14
SRFBP1Q8NEF9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SRFBP1Q8NEF9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SRFBP1Q8NEF9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 RNA5SP416-201ENST00000516838 111 ntBASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 MIR3909-201ENST00000579518 119 ntBASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.93■□□□□ 0.14
SRFBP1Q8NEF9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 PMS2P4-201ENST00000412466 1052 ntBASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 FAM197Y3-203ENST00000618346 717 ntBASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 AC010507.1-201ENST00000633895 436 ntBASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SRFBP1Q8NEF9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 SNX33P1-201ENST00000592116 1762 ntBASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AC021097.1-201ENST00000607902 574 ntBASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms