Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 AC067930.6-201ENST00000623257 4947 ntBASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 HLA-A-202ENST00000376806 1854 ntBASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZNF439Q8NDP4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AC002310.6-201ENST00000624451 1377 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AC018712.1-201ENST00000455767 687 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 RNPS1P1-201ENST00000507437 918 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AC073648.2-201ENST00000510116 352 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 OR7E14P-202ENST00000530490 1290 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL121912.1-201ENST00000603683 238 ntBASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF439Q8NDP4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF439Q8NDP4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms