Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 5S_rRNA.22-201ENST00000614916 106 ntBASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFAP43Q8NDM7 PCDHB18P-201ENST00000524813 2368 ntBASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 MFF-223ENST00000524634 647 ntTSL 2 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 MIR6787-201ENST00000616675 61 ntBASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 KRT8P44-201ENST00000441609 1350 ntBASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP43Q8NDM7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 CTBP2P3-201ENST00000585629 1255 ntBASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 AC105020.1-201ENST00000435356 2205 ntBASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.62■■□□□ 1.69
CFAP43Q8NDM7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC098850.1-201ENST00000419919 790 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC023310.3-201ENST00000557027 670 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC044860.1-202ENST00000559481 777 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC100756.1-201ENST00000562736 682 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC138749.3-201ENST00000567691 622 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 MIR4538-201ENST00000581377 78 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC116165.1-201ENST00000611806 668 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 AC020765.3-201ENST00000613051 740 ntBASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC25.61■■□□□ 1.69
CFAP43Q8NDM7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 SRD5A3P1-201ENST00000603021 949 ntBASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC25.6■■□□□ 1.69
CFAP43Q8NDM7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms