Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AC243562.1-201ENST00000560672 389 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AL691403.2-201ENST00000618460 490 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AL513210.1-201ENST00000629608 234 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AC079140.1-201ENST00000508039 487 ntBASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AP000344.2-201ENST00000512987 629 ntBASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AC022145.2-201ENST00000598203 171 ntBASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 AC079781.4-201ENST00000641908 219 ntBASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAM1L1Q8N609 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 PCGF3-213ENST00000620529 1899 ntBASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 GPALPP1-207ENST00000611650 899 ntBASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAM1L1Q8N609 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms