Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 RN7SL606P-201ENST00000472779 293 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AC005336.2-201ENST00000593183 939 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AC091076.1-201ENST00000610741 619 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AC083849.1-201ENST00000615227 514 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 AD001527.2-201ENST00000622994 785 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 LINC02228-204ENST00000642115 2962 ntBASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM42Q8IWZ5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
TRIM42Q8IWZ5 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 PCED1CP-201ENST00000419887 785 ntBASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 VENTXP5-201ENST00000523979 775 ntBASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AC073592.5-201ENST00000624854 528 ntBASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM42Q8IWZ5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AL603832.2-201ENST00000566195 2125 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AL136038.3-201ENST00000561909 1096 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms