Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA4Q8IV77 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA4Q8IV77 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 NCF1C-201ENST00000438382 1427 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 AP002383.4-201ENST00000442518 975 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 LINC00265-3P-201ENST00000447588 903 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 POU5F1P6-201ENST00000466990 990 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 MPDU1-223ENST00000582151 728 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 AP002414.4-201ENST00000589764 1148 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 AC092329.2-201ENST00000598402 547 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.15■□□□□ 0.5
CNGA4Q8IV77 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA4Q8IV77 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNGA4Q8IV77 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 NFIC-211ENST00000641145 8399 ntBASIC18.14■□□□□ 0.49
CNGA4Q8IV77 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 AC074051.2-201ENST00000565115 352 ntBASIC18.14■□□□□ 0.49
CNGA4Q8IV77 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA4Q8IV77 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA4Q8IV77 AC126177.1-201ENST00000547829 2218 ntBASIC18.13■□□□□ 0.49
CNGA4Q8IV77 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA4Q8IV77 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms