Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.22■□□□□ 0.03
NIPAL3Q6P499 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 AC006538.1-201ENST00000567905 1585 ntBASIC15.21■□□□□ 0.03
NIPAL3Q6P499 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 AP001005.1-201ENST00000571755 1248 ntBASIC15.21■□□□□ 0.03
NIPAL3Q6P499 SLC25A6P4-201ENST00000586535 553 ntBASIC15.21■□□□□ 0.03
NIPAL3Q6P499 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NIPAL3Q6P499 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 AL021920.2-201ENST00000624828 1351 ntBASIC15.21■□□□□ 0.02
NIPAL3Q6P499 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NIPAL3Q6P499 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PTCHD3P3-201ENST00000403073 906 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 KRT18P27-201ENST00000427733 1299 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AC136632.2-201ENST00000512891 861 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AC012640.2-201ENST00000561606 901 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 AL049840.3-201ENST00000602669 611 ntBASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.2■□□□□ 0.02
NIPAL3Q6P499 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms