Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.12■□□□□ 0.33
ALFQ53S48 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 AC016027.1-202ENST00000607927 1699 ntBASIC17.12■□□□□ 0.33
ALFQ53S48 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
ALFQ53S48 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ALFQ53S48 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ALFQ53S48 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
ALFQ53S48 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.12■□□□□ 0.33
ALFQ53S48 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALFQ53S48 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALFQ53S48 AL031731.1-201ENST00000642131 2094 ntBASIC17.11■□□□□ 0.33
ALFQ53S48 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ALFQ53S48 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.11■□□□□ 0.33
ALFQ53S48 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 AC004967.1-201ENST00000453589 447 ntBASIC17.11■□□□□ 0.33
ALFQ53S48 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.11■□□□□ 0.33
ALFQ53S48 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.11■□□□□ 0.33
ALFQ53S48 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 GPALPP1-207ENST00000611650 899 ntBASIC17.11■□□□□ 0.33
ALFQ53S48 AL161645.1-201ENST00000622716 1255 ntBASIC17.11■□□□□ 0.33
ALFQ53S48 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ALFQ53S48 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.11■□□□□ 0.33
ALFQ53S48 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALFQ53S48 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ALFQ53S48 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ALFQ53S48 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
ALFQ53S48 RPS8P6-201ENST00000426177 609 ntBASIC17.1■□□□□ 0.33
ALFQ53S48 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.1■□□□□ 0.33
ALFQ53S48 HLA-J-202ENST00000469281 1241 ntBASIC17.1■□□□□ 0.33
ALFQ53S48 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
ALFQ53S48 KRT8P48-201ENST00000515599 1220 ntBASIC17.1■□□□□ 0.33
ALFQ53S48 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
ALFQ53S48 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.1■□□□□ 0.33
ALFQ53S48 RARRES2P8-201ENST00000566335 367 ntBASIC17.1■□□□□ 0.33
ALFQ53S48 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
ALFQ53S48 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.1■□□□□ 0.33
ALFQ53S48 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALFQ53S48 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.1■□□□□ 0.33
ALFQ53S48 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ALFQ53S48 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALFQ53S48 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ALFQ53S48 GGT4P-201ENST00000623672 1708 ntBASIC17.1■□□□□ 0.33
ALFQ53S48 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ALFQ53S48 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALFQ53S48 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms