Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC067863.1-201ENST00000494933 530 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC109322.1-201ENST00000524499 1264 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC027307.2-201ENST00000591252 911 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 AP001059.3-201ENST00000619053 235 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 KRT8P39-201ENST00000396270 1433 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC092068.3-201ENST00000587894 2016 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EFNB3Q15768 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 UXT-AS1-201ENST00000590504 1525 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
EFNB3Q15768 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNB3Q15768 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNB3Q15768 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 FAM58DP-201ENST00000428076 619 ntBASIC14.19□□□□□ -0.14
EFNB3Q15768 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNB3Q15768 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 AP000842.3-202ENST00000569238 1080 ntBASIC14.19□□□□□ -0.14
EFNB3Q15768 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNB3Q15768 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EFNB3Q15768 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
EFNB3Q15768 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB3Q15768 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB3Q15768 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
EFNB3Q15768 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNB3Q15768 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
EFNB3Q15768 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
EFNB3Q15768 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EFNB3Q15768 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB3Q15768 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.18□□□□□ -0.14
EFNB3Q15768 GPS2P2-201ENST00000430745 888 ntBASIC14.18□□□□□ -0.14
EFNB3Q15768 HMGN1P19-201ENST00000436976 333 ntBASIC14.18□□□□□ -0.14
EFNB3Q15768 CNN2P2-201ENST00000443536 909 ntBASIC14.18□□□□□ -0.14
EFNB3Q15768 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNB3Q15768 FAM86GP-201ENST00000448322 971 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms