Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 TDH-203ENST00000531764 1110 ntBASIC18.85■□□□□ 0.61
SREBF2Q12772 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SREBF2Q12772 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.85■□□□□ 0.61
SREBF2Q12772 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.85■□□□□ 0.61
SREBF2Q12772 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.85■□□□□ 0.61
SREBF2Q12772 AC243960.2-201ENST00000600996 747 ntBASIC18.85■□□□□ 0.61
SREBF2Q12772 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.85■□□□□ 0.61
SREBF2Q12772 AC133539.2-201ENST00000604757 467 ntBASIC18.85■□□□□ 0.61
SREBF2Q12772 CU634019.7-201ENST00000624153 1185 ntBASIC18.85■□□□□ 0.61
SREBF2Q12772 FP236241.2-201ENST00000624906 1185 ntBASIC18.85■□□□□ 0.61
SREBF2Q12772 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.85■□□□□ 0.61
SREBF2Q12772 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SREBF2Q12772 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.85■□□□□ 0.61
SREBF2Q12772 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SREBF2Q12772 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SREBF2Q12772 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SREBF2Q12772 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SREBF2Q12772 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SREBF2Q12772 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SREBF2Q12772 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.84■□□□□ 0.61
SREBF2Q12772 AL442647.2-201ENST00000429864 857 ntBASIC18.84■□□□□ 0.61
SREBF2Q12772 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.84■□□□□ 0.61
SREBF2Q12772 MIR3615-201ENST00000581999 87 ntBASIC18.84■□□□□ 0.61
SREBF2Q12772 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.84■□□□□ 0.61
SREBF2Q12772 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SREBF2Q12772 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.84■□□□□ 0.61
SREBF2Q12772 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.84■□□□□ 0.61
SREBF2Q12772 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SREBF2Q12772 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.84■□□□□ 0.61
SREBF2Q12772 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SREBF2Q12772 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.83■□□□□ 0.61
SREBF2Q12772 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
SREBF2Q12772 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SREBF2Q12772 AC116353.5-201ENST00000638148 1699 ntBASIC18.83■□□□□ 0.61
SREBF2Q12772 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.83■□□□□ 0.6
SREBF2Q12772 RPL7P3-201ENST00000441388 714 ntBASIC18.83■□□□□ 0.6
SREBF2Q12772 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.83■□□□□ 0.6
SREBF2Q12772 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.83■□□□□ 0.6
SREBF2Q12772 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.83■□□□□ 0.6
SREBF2Q12772 RN7SL399P-201ENST00000471648 279 ntBASIC18.83■□□□□ 0.6
SREBF2Q12772 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.83■□□□□ 0.6
SREBF2Q12772 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.83■□□□□ 0.6
SREBF2Q12772 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.83■□□□□ 0.6
SREBF2Q12772 AC036164.1-201ENST00000570544 333 ntBASIC18.83■□□□□ 0.6
SREBF2Q12772 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.83■□□□□ 0.6
SREBF2Q12772 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.83■□□□□ 0.6
SREBF2Q12772 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SREBF2Q12772 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SREBF2Q12772 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SREBF2Q12772 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 MIR1247-201ENST00000408206 136 ntBASIC18.82■□□□□ 0.6
SREBF2Q12772 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.82■□□□□ 0.6
SREBF2Q12772 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.82■□□□□ 0.6
SREBF2Q12772 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.82■□□□□ 0.6
SREBF2Q12772 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.82■□□□□ 0.6
SREBF2Q12772 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.82■□□□□ 0.6
SREBF2Q12772 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SREBF2Q12772 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms