Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SKP1P63208 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.82■□□□□ 0.12
SKP1P63208 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.82■□□□□ 0.12
SKP1P63208 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.82■□□□□ 0.12
SKP1P63208 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 FAM58CP-201ENST00000435741 640 ntBASIC15.82■□□□□ 0.12
SKP1P63208 RN7SL589P-201ENST00000481268 310 ntBASIC15.82■□□□□ 0.12
SKP1P63208 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.82■□□□□ 0.12
SKP1P63208 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.82■□□□□ 0.12
SKP1P63208 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.82■□□□□ 0.12
SKP1P63208 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.82■□□□□ 0.12
SKP1P63208 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.82■□□□□ 0.12
SKP1P63208 AC091812.2-201ENST00000619081 385 ntBASIC15.82■□□□□ 0.12
SKP1P63208 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SKP1P63208 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SKP1P63208 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 AC006538.1-201ENST00000567905 1585 ntBASIC15.82■□□□□ 0.12
SKP1P63208 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.82■□□□□ 0.12
SKP1P63208 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SKP1P63208 AL645728.1-201ENST00000366221 2101 ntBASIC15.82■□□□□ 0.12
SKP1P63208 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SKP1P63208 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SKP1P63208 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 UPF3AP3-201ENST00000420996 769 ntBASIC15.81■□□□□ 0.12
SKP1P63208 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.81■□□□□ 0.12
SKP1P63208 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.81■□□□□ 0.12
SKP1P63208 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 AP002472.1-201ENST00000577490 586 ntBASIC15.81■□□□□ 0.12
SKP1P63208 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SKP1P63208 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.81■□□□□ 0.12
SKP1P63208 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
SKP1P63208 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SKP1P63208 AC020765.3-201ENST00000613051 740 ntBASIC15.81■□□□□ 0.12
SKP1P63208 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.81■□□□□ 0.12
SKP1P63208 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SKP1P63208 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SKP1P63208 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SKP1P63208 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.8■□□□□ 0.12
SKP1P63208 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SKP1P63208 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
SKP1P63208 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SKP1P63208 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SKP1P63208 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.8■□□□□ 0.12
SKP1P63208 HTR5BP-201ENST00000430851 1154 ntBASIC15.8■□□□□ 0.12
SKP1P63208 KRT18P34-201ENST00000488218 1270 ntBASIC15.8■□□□□ 0.12
SKP1P63208 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.8■□□□□ 0.12
SKP1P63208 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.8■□□□□ 0.12
SKP1P63208 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.8■□□□□ 0.12
SKP1P63208 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms