Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
ACTBP60709 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 AL603832.2-201ENST00000566195 2125 ntBASIC14.39□□□□□ -0.11
ACTBP60709 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.39□□□□□ -0.11
ACTBP60709 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
ACTBP60709 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ACTBP60709 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.39□□□□□ -0.11
ACTBP60709 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.39□□□□□ -0.11
ACTBP60709 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.39□□□□□ -0.11
ACTBP60709 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ACTBP60709 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ACTBP60709 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 AC099063.4-201ENST00000641099 1602 ntBASIC14.38□□□□□ -0.11
ACTBP60709 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.38□□□□□ -0.11
ACTBP60709 TSPY22P-201ENST00000427496 604 ntBASIC14.38□□□□□ -0.11
ACTBP60709 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.38□□□□□ -0.11
ACTBP60709 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.38□□□□□ -0.11
ACTBP60709 AC011498.5-201ENST00000592027 486 ntBASIC14.38□□□□□ -0.11
ACTBP60709 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.38□□□□□ -0.11
ACTBP60709 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.38□□□□□ -0.11
ACTBP60709 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 DBET-201ENST00000630918 3363 ntBASIC14.38□□□□□ -0.11
ACTBP60709 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ACTBP60709 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACTBP60709 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.37□□□□□ -0.11
ACTBP60709 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms