Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.66■□□□□ 0.42
CACNA2D1P54289 TIMM8BP1-201ENST00000452384 211 ntBASIC17.66■□□□□ 0.42
CACNA2D1P54289 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 SNHG9-202ENST00000564014 471 ntBASIC17.66■□□□□ 0.42
CACNA2D1P54289 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 AL391256.1-201ENST00000443260 1855 ntBASIC17.66■□□□□ 0.42
CACNA2D1P54289 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 UBALD1-205ENST00000590891 2641 ntBASIC17.65■□□□□ 0.42
CACNA2D1P54289 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 AC243562.1-201ENST00000560672 389 ntBASIC17.65■□□□□ 0.42
CACNA2D1P54289 AC093520.2-201ENST00000561830 333 ntBASIC17.65■□□□□ 0.42
CACNA2D1P54289 AL135744.1-201ENST00000565098 629 ntBASIC17.65■□□□□ 0.42
CACNA2D1P54289 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 AP001350.2-201ENST00000625104 1094 ntBASIC17.65■□□□□ 0.42
CACNA2D1P54289 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CACNA2D1P54289 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA2D1P54289 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CACNA2D1P54289 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CACNA2D1P54289 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CACNA2D1P54289 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
CACNA2D1P54289 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CACNA2D1P54289 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.64■□□□□ 0.42
CACNA2D1P54289 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CACNA2D1P54289 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.64■□□□□ 0.42
CACNA2D1P54289 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.64■□□□□ 0.42
CACNA2D1P54289 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 TFAMP1-201ENST00000412727 736 ntBASIC17.64■□□□□ 0.41
CACNA2D1P54289 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 AC026120.1-201ENST00000611536 926 ntBASIC17.64■□□□□ 0.41
CACNA2D1P54289 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 AC079781.4-201ENST00000641908 219 ntBASIC17.64■□□□□ 0.41
CACNA2D1P54289 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA2D1P54289 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
CACNA2D1P54289 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms