Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
LIMK2P53671 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 RPSAP43-201ENST00000402237 625 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LIMK2P53671 AC004832.2-201ENST00000426397 482 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.82■□□□□ 0.28
LIMK2P53671 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.82■□□□□ 0.28
LIMK2P53671 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.82■□□□□ 0.28
LIMK2P53671 MIR3687-2-201ENST00000577708 61 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 AC010327.4-202ENST00000591484 748 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 AC064836.3-201ENST00000607928 673 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 MIR3687-1-201ENST00000614492 61 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.82■□□□□ 0.28
LIMK2P53671 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 AC046158.3-201ENST00000624947 2558 ntBASIC16.82■□□□□ 0.28
LIMK2P53671 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK2P53671 ELK2BP-201ENST00000415014 1224 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK2P53671 GPX1P2-201ENST00000429271 606 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 AC092183.1-201ENST00000469884 875 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LIMK2P53671 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK2P53671 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 AL691403.2-201ENST00000618460 490 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 AC055717.3-201ENST00000622967 595 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 AC005052.1-201ENST00000625181 2492 ntBASIC16.81■□□□□ 0.28
LIMK2P53671 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LIMK2P53671 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK2P53671 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
LIMK2P53671 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK2P53671 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 PAWRP1-201ENST00000451083 565 ntBASIC16.8■□□□□ 0.28
LIMK2P53671 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 AC002347.1-201ENST00000569543 541 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms