Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.43■□□□□ 0.86
NUP98P52948 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NUP98P52948 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 MIR1909-201ENST00000411312 80 ntBASIC20.43■□□□□ 0.86
NUP98P52948 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
NUP98P52948 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NUP98P52948 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.43■□□□□ 0.86
NUP98P52948 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.43■□□□□ 0.86
NUP98P52948 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP98P52948 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.43■□□□□ 0.86
NUP98P52948 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.43■□□□□ 0.86
NUP98P52948 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP98P52948 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUP98P52948 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 AL139010.1-201ENST00000454878 894 ntBASIC20.42■□□□□ 0.86
NUP98P52948 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.42■□□□□ 0.86
NUP98P52948 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUP98P52948 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP98P52948 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
NUP98P52948 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP98P52948 AP001094.4-201ENST00000579008 2176 ntBASIC20.42■□□□□ 0.86
NUP98P52948 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.41■□□□□ 0.86
NUP98P52948 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.41■□□□□ 0.86
NUP98P52948 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.41■□□□□ 0.86
NUP98P52948 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.41■□□□□ 0.86
NUP98P52948 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.41■□□□□ 0.86
NUP98P52948 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.41■□□□□ 0.86
NUP98P52948 AC025048.3-201ENST00000590609 569 ntBASIC20.41■□□□□ 0.86
NUP98P52948 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NUP98P52948 LINC01115-203ENST00000606068 577 ntBASIC20.41■□□□□ 0.86
NUP98P52948 AC005702.4-201ENST00000618393 416 ntBASIC20.41■□□□□ 0.86
NUP98P52948 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.41■□□□□ 0.86
NUP98P52948 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.41■□□□□ 0.86
NUP98P52948 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUP98P52948 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NUP98P52948 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.41■□□□□ 0.86
NUP98P52948 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NUP98P52948 DOC2GP-202ENST00000514950 1163 ntBASIC20.41■□□□□ 0.86
NUP98P52948 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.41■□□□□ 0.86
NUP98P52948 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.41■□□□□ 0.86
NUP98P52948 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.41■□□□□ 0.86
NUP98P52948 AC007541.1-201ENST00000570282 1469 ntBASIC20.41■□□□□ 0.86
NUP98P52948 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms