Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GTF2A1P52655 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.4■□□□□ 0.22
GTF2A1P52655 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.4■□□□□ 0.22
GTF2A1P52655 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.4■□□□□ 0.22
GTF2A1P52655 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.4■□□□□ 0.22
GTF2A1P52655 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 BEND3P1-201ENST00000421591 1944 ntBASIC16.4■□□□□ 0.22
GTF2A1P52655 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.4■□□□□ 0.22
GTF2A1P52655 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GTF2A1P52655 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GTF2A1P52655 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.4■□□□□ 0.22
GTF2A1P52655 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
GTF2A1P52655 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GTF2A1P52655 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.39■□□□□ 0.21
GTF2A1P52655 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.39■□□□□ 0.21
GTF2A1P52655 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GTF2A1P52655 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GTF2A1P52655 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GTF2A1P52655 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GTF2A1P52655 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GTF2A1P52655 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
GTF2A1P52655 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GTF2A1P52655 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GTF2A1P52655 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
GTF2A1P52655 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms