Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KRT16P4-201ENST00000453883 522 ntBASIC10.63□□□□□ -0.71
UBE2AP49459 AP002490.2-201ENST00000524791 560 ntBASIC10.63□□□□□ -0.71
UBE2AP49459 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
UBE2AP49459 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.63□□□□□ -0.71
UBE2AP49459 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.63□□□□□ -0.71
UBE2AP49459 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.63□□□□□ -0.71
UBE2AP49459 MIR3652-201ENST00000579335 131 ntBASIC10.63□□□□□ -0.71
UBE2AP49459 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 COPE-211ENST00000600932 1144 ntTSL 5 BASIC10.63□□□□□ -0.71
UBE2AP49459 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.63□□□□□ -0.71
UBE2AP49459 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
UBE2AP49459 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 AC005915.1-201ENST00000624912 2018 ntBASIC10.63□□□□□ -0.71
UBE2AP49459 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.63□□□□□ -0.71
UBE2AP49459 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.63□□□□□ -0.71
UBE2AP49459 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.63□□□□□ -0.71
UBE2AP49459 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 PEG13-201ENST00000631594 5667 ntBASIC10.63□□□□□ -0.71
UBE2AP49459 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC10.63□□□□□ -0.71
UBE2AP49459 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.63□□□□□ -0.71
UBE2AP49459 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
UBE2AP49459 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
UBE2AP49459 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
UBE2AP49459 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
UBE2AP49459 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 PCDHA14-201ENST00000506751 2298 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
UBE2AP49459 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 HCG4P8-203ENST00000443049 980 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 ABCD1P5-201ENST00000445663 754 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.62□□□□□ -0.71
UBE2AP49459 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.62□□□□□ -0.71
UBE2AP49459 PRELID1P1-202ENST00000567272 903 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 MIR5100-201ENST00000579544 119 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC10.62□□□□□ -0.71
UBE2AP49459 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 AC092053.1-201ENST00000605787 1936 ntBASIC10.62□□□□□ -0.71
UBE2AP49459 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2AP49459 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms