Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFSF9P41273 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFSF9P41273 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFSF9P41273 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.98■□□□□ 0.47
TNFSF9P41273 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.98■□□□□ 0.47
TNFSF9P41273 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFSF9P41273 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.97■□□□□ 0.47
TNFSF9P41273 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.97■□□□□ 0.47
TNFSF9P41273 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.97■□□□□ 0.47
TNFSF9P41273 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 AC023141.5-201ENST00000458585 616 ntBASIC17.97■□□□□ 0.47
TNFSF9P41273 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 AC008267.7-201ENST00000624570 1194 ntBASIC17.97■□□□□ 0.47
TNFSF9P41273 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFSF9P41273 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 AC005052.1-201ENST00000625181 2492 ntBASIC17.97■□□□□ 0.47
TNFSF9P41273 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFSF9P41273 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TNFSF9P41273 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFSF9P41273 AC020916.1-201ENST00000587762 1774 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 AC073439.1-201ENST00000624121 1774 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 GGT3P-204ENST00000453783 1664 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFSF9P41273 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
TNFSF9P41273 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TNFSF9P41273 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.96■□□□□ 0.47
TNFSF9P41273 METTL21AP1-201ENST00000438852 635 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TNFSF9P41273 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.96■□□□□ 0.47
TNFSF9P41273 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.96■□□□□ 0.47
TNFSF9P41273 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 UXT-AS1-201ENST00000590504 1525 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFSF9P41273 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.96■□□□□ 0.47
TNFSF9P41273 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNFSF9P41273 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFSF9P41273 ALOX12P2-203ENST00000570921 1945 ntBASIC17.96■□□□□ 0.47
TNFSF9P41273 KRT18P28-201ENST00000453838 1332 ntBASIC17.96■□□□□ 0.46
TNFSF9P41273 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
TNFSF9P41273 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
TNFSF9P41273 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNFSF9P41273 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNFSF9P41273 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNFSF9P41273 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNFSF9P41273 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TNFSF9P41273 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TNFSF9P41273 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TNFSF9P41273 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFSF9P41273 FOXO1B-201ENST00000504678 1527 ntBASIC17.95■□□□□ 0.46
TNFSF9P41273 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFSF9P41273 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFSF9P41273 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFSF9P41273 IGHV3-62-201ENST00000520057 340 ntBASIC17.95■□□□□ 0.46
TNFSF9P41273 SLC25A39P2-201ENST00000537614 270 ntBASIC17.95■□□□□ 0.46
TNFSF9P41273 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 AP000842.3-202ENST00000569238 1080 ntBASIC17.95■□□□□ 0.46
TNFSF9P41273 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFSF9P41273 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TNFSF9P41273 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFSF9P41273 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms