Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
CHMP24386 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.64■□□□□ 0.1
CHMP24386 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 ZNF259P1-201ENST00000407656 1365 ntBASIC15.64■□□□□ 0.09
CHMP24386 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 AL135999.2-201ENST00000622438 1686 ntBASIC15.64■□□□□ 0.09
CHMP24386 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CHMP24386 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 AC073621.1-201ENST00000392730 636 ntBASIC15.64■□□□□ 0.09
CHMP24386 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 LINC00982-205ENST00000420957 435 ntBASIC15.64■□□□□ 0.09
CHMP24386 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 PMS2P1-201ENST00000431037 1228 ntBASIC15.64■□□□□ 0.09
CHMP24386 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP24386 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP24386 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP24386 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CHMP24386 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 LINC00554-201ENST00000564841 3011 ntBASIC15.64■□□□□ 0.09
CHMP24386 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CHMP24386 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 GPR89P-201ENST00000407924 1495 ntBASIC15.64■□□□□ 0.09
CHMP24386 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CHMP24386 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP24386 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP24386 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 AL391256.1-201ENST00000443260 1855 ntBASIC15.63■□□□□ 0.09
CHMP24386 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CHMP24386 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.63■□□□□ 0.09
CHMP24386 AC098831.1-202ENST00000438821 336 ntBASIC15.63■□□□□ 0.09
CHMP24386 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.63■□□□□ 0.09
CHMP24386 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP24386 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP24386 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CHMP24386 AL353135.1-201ENST00000606729 504 ntBASIC15.63■□□□□ 0.09
CHMP24386 AC005593.1-201ENST00000624894 515 ntBASIC15.63■□□□□ 0.09
CHMP24386 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
CHMP24386 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 AP002414.3-201ENST00000589352 1468 ntBASIC15.63■□□□□ 0.09
CHMP24386 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP24386 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP24386 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHMP24386 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP24386 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP24386 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms