Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MMP8P22894 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP8P22894 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MMP8P22894 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP8P22894 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.5■□□□□ 0.39
MMP8P22894 AC106730.1-201ENST00000566722 1090 ntBASIC17.5■□□□□ 0.39
MMP8P22894 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP8P22894 AC120114.3-201ENST00000611923 658 ntBASIC17.5■□□□□ 0.39
MMP8P22894 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
MMP8P22894 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MMP8P22894 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP8P22894 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MMP8P22894 BCAR1-209ENST00000546196 1340 ntBASIC17.49■□□□□ 0.39
MMP8P22894 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.49■□□□□ 0.39
MMP8P22894 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.49■□□□□ 0.39
MMP8P22894 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP8P22894 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 KRT19P2-202ENST00000557173 1012 ntBASIC17.49■□□□□ 0.39
MMP8P22894 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP8P22894 AL009183.1-201ENST00000603760 355 ntBASIC17.49■□□□□ 0.39
MMP8P22894 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP8P22894 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MMP8P22894 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP8P22894 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP8P22894 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP8P22894 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MMP8P22894 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP8P22894 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MMP8P22894 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.48■□□□□ 0.39
MMP8P22894 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.48■□□□□ 0.39
MMP8P22894 AC140658.5-201ENST00000438532 169 ntBASIC17.48■□□□□ 0.39
MMP8P22894 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
MMP8P22894 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP8P22894 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP8P22894 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms