Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT4P19013 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 AL136038.3-201ENST00000561909 1096 ntBASIC16.78■□□□□ 0.28
KRT4P19013 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KRT4P19013 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KRT4P19013 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT4P19013 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
KRT4P19013 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT4P19013 SNX33P1-201ENST00000592116 1762 ntBASIC16.77■□□□□ 0.28
KRT4P19013 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KRT4P19013 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT4P19013 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.77■□□□□ 0.28
KRT4P19013 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 CHCHD2P8-201ENST00000429873 447 ntBASIC16.77■□□□□ 0.28
KRT4P19013 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.77■□□□□ 0.28
KRT4P19013 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT4P19013 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 TERC-201ENST00000602385 541 ntBASIC16.77■□□□□ 0.28
KRT4P19013 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT4P19013 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT4P19013 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KRT4P19013 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT4P19013 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KRT4P19013 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
KRT4P19013 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT4P19013 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT4P19013 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT4P19013 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 AL512652.2-201ENST00000625156 1716 ntBASIC16.76■□□□□ 0.27
KRT4P19013 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.76■□□□□ 0.27
KRT4P19013 RCN1P2-201ENST00000398357 915 ntBASIC16.76■□□□□ 0.27
KRT4P19013 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 MINOS1P3-201ENST00000457048 203 ntBASIC16.76■□□□□ 0.27
KRT4P19013 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.76■□□□□ 0.27
KRT4P19013 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms