Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPB42P16452 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPB42P16452 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPB42P16452 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPB42P16452 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPB42P16452 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 AC018695.7-201ENST00000624587 2492 ntBASIC16.26■□□□□ 0.19
EPB42P16452 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 AC004870.1-201ENST00000315132 882 ntBASIC16.26■□□□□ 0.19
EPB42P16452 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 SLC22A20-204ENST00000530038 1673 ntBASIC16.26■□□□□ 0.19
EPB42P16452 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 AC092364.2-201ENST00000596710 2692 ntBASIC16.26■□□□□ 0.19
EPB42P16452 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPB42P16452 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.26■□□□□ 0.19
EPB42P16452 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
EPB42P16452 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
EPB42P16452 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 AL512652.2-201ENST00000625156 1716 ntBASIC16.25■□□□□ 0.19
EPB42P16452 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 AP002414.3-201ENST00000589352 1468 ntBASIC16.25■□□□□ 0.19
EPB42P16452 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 FAAHP1-202ENST00000446499 1238 ntBASIC16.25■□□□□ 0.19
EPB42P16452 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.25■□□□□ 0.19
EPB42P16452 AC087641.1-201ENST00000557561 1021 ntBASIC16.25■□□□□ 0.19
EPB42P16452 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.25■□□□□ 0.19
EPB42P16452 RN7SL510P-201ENST00000581311 263 ntBASIC16.25■□□□□ 0.19
EPB42P16452 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.25■□□□□ 0.19
EPB42P16452 CYP2A7P1-201ENST00000595391 815 ntBASIC16.25■□□□□ 0.19
EPB42P16452 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.25■□□□□ 0.19
EPB42P16452 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 PCDH8P1-201ENST00000428983 2773 ntBASIC16.25■□□□□ 0.19
EPB42P16452 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPB42P16452 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPB42P16452 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
EPB42P16452 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPB42P16452 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
EPB42P16452 GGT3P-204ENST00000453783 1664 ntBASIC16.24■□□□□ 0.19
EPB42P16452 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
EPB42P16452 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPB42P16452 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPB42P16452 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPB42P16452 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPB42P16452 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
EPB42P16452 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
EPB42P16452 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms