Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC006538.1-201ENST00000567905 1585 ntBASIC17.64■□□□□ 0.41
CCDC130P13994 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 AL031731.1-201ENST00000642131 2094 ntBASIC17.63■□□□□ 0.41
CCDC130P13994 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC130P13994 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 TFAMP1-201ENST00000412727 736 ntBASIC17.63■□□□□ 0.41
CCDC130P13994 AP006288.1-201ENST00000446065 395 ntBASIC17.63■□□□□ 0.41
CCDC130P13994 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC130P13994 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC130P13994 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CCDC130P13994 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC130P13994 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC130P13994 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 WASH6P-202ENST00000359512 1437 ntBASIC17.63■□□□□ 0.41
CCDC130P13994 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC130P13994 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC130P13994 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC130P13994 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CCDC130P13994 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC130P13994 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC130P13994 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC130P13994 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 AC026120.1-201ENST00000611536 926 ntBASIC17.62■□□□□ 0.41
CCDC130P13994 AC105339.1-204ENST00000636249 355 ntBASIC17.62■□□□□ 0.41
CCDC130P13994 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC130P13994 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC130P13994 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC130P13994 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 GGT4P-201ENST00000623672 1708 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC130P13994 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 SPDYE11-202ENST00000450699 704 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC130P13994 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms