Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CD28P10747 PMS2P4-201ENST00000412466 1052 ntBASIC13.03□□□□□ -0.32
CD28P10747 KLF2P3-201ENST00000451977 1087 ntBASIC13.03□□□□□ -0.32
CD28P10747 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 AC125807.1-201ENST00000483097 614 ntBASIC13.03□□□□□ -0.32
CD28P10747 AL512356.2-201ENST00000546955 174 ntBASIC13.03□□□□□ -0.32
CD28P10747 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.03□□□□□ -0.32
CD28P10747 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.03□□□□□ -0.32
CD28P10747 MIR4745-201ENST00000577608 62 ntBASIC13.03□□□□□ -0.32
CD28P10747 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 AC027307.2-201ENST00000591252 911 ntBASIC13.03□□□□□ -0.32
CD28P10747 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.02□□□□□ -0.32
CD28P10747 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.02□□□□□ -0.32
CD28P10747 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.02□□□□□ -0.32
CD28P10747 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD28P10747 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 AL035633.1-201ENST00000406139 838 ntBASIC13.02□□□□□ -0.33
CD28P10747 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.02□□□□□ -0.33
CD28P10747 INGX-202ENST00000489074 768 ntBASIC13.02□□□□□ -0.33
CD28P10747 RNA5SP421-201ENST00000516864 134 ntBASIC13.02□□□□□ -0.33
CD28P10747 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.02□□□□□ -0.33
CD28P10747 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 AC051619.7-201ENST00000568314 623 ntBASIC13.02□□□□□ -0.33
CD28P10747 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.02□□□□□ -0.33
CD28P10747 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD28P10747 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 KRT8P49-201ENST00000604166 1432 ntBASIC13.02□□□□□ -0.33
CD28P10747 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD28P10747 AC008677.1-201ENST00000519230 1561 ntBASIC13.02□□□□□ -0.33
CD28P10747 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD28P10747 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.02□□□□□ -0.33
CD28P10747 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD28P10747 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.02□□□□□ -0.33
CD28P10747 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD28P10747 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD28P10747 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.01□□□□□ -0.33
CD28P10747 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.01□□□□□ -0.33
CD28P10747 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD28P10747 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms