Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.64■□□□□ 0.58
CYP3A4P08684 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.64■□□□□ 0.57
CYP3A4P08684 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CYP3A4P08684 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 FAM220BP-201ENST00000377689 816 ntBASIC18.64■□□□□ 0.57
CYP3A4P08684 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.64■□□□□ 0.57
CYP3A4P08684 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.64■□□□□ 0.57
CYP3A4P08684 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CYP3A4P08684 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 AC092171.3-201ENST00000610122 2651 ntBASIC18.64■□□□□ 0.57
CYP3A4P08684 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CYP3A4P08684 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CYP3A4P08684 AP3S2-216ENST00000617003 1561 ntBASIC18.64■□□□□ 0.57
CYP3A4P08684 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.63■□□□□ 0.57
CYP3A4P08684 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CYP3A4P08684 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.63■□□□□ 0.57
CYP3A4P08684 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CYP3A4P08684 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.63■□□□□ 0.57
CYP3A4P08684 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.63■□□□□ 0.57
CYP3A4P08684 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 POU5F1P6-201ENST00000466990 990 ntBASIC18.63■□□□□ 0.57
CYP3A4P08684 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.63■□□□□ 0.57
CYP3A4P08684 AC025678.2-201ENST00000562061 970 ntBASIC18.63■□□□□ 0.57
CYP3A4P08684 AC004449.1-201ENST00000564240 433 ntBASIC18.63■□□□□ 0.57
CYP3A4P08684 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CYP3A4P08684 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 AC093028.1-201ENST00000622998 982 ntBASIC18.63■□□□□ 0.57
CYP3A4P08684 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.63■□□□□ 0.57
CYP3A4P08684 AL589702.1-201ENST00000641229 1509 ntBASIC18.63■□□□□ 0.57
CYP3A4P08684 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CYP3A4P08684 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CYP3A4P08684 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CYP3A4P08684 AL645939.2-201ENST00000427340 991 ntBASIC18.62■□□□□ 0.57
CYP3A4P08684 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.62■□□□□ 0.57
CYP3A4P08684 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 AC069262.1-201ENST00000539058 672 ntBASIC18.62■□□□□ 0.57
CYP3A4P08684 RARRES2P9-201ENST00000565168 469 ntBASIC18.62■□□□□ 0.57
CYP3A4P08684 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.62■□□□□ 0.57
CYP3A4P08684 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 AC005622.1-201ENST00000636801 1703 ntBASIC18.62■□□□□ 0.57
CYP3A4P08684 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
CYP3A4P08684 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.62■□□□□ 0.57
CYP3A4P08684 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CYP3A4P08684 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CYP3A4P08684 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYP3A4P08684 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms