Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.31■□□□□ 0.84
CSF1RP07333 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
CSF1RP07333 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 AC005622.1-201ENST00000636801 1703 ntBASIC20.3■□□□□ 0.84
CSF1RP07333 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.3■□□□□ 0.84
CSF1RP07333 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.3■□□□□ 0.84
CSF1RP07333 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSF1RP07333 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 FZD10-202ENST00000539839 3282 ntBASIC20.3■□□□□ 0.84
CSF1RP07333 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CSF1RP07333 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CSF1RP07333 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSF1RP07333 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CSF1RP07333 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
CSF1RP07333 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CSF1RP07333 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CSF1RP07333 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.29■□□□□ 0.84
CSF1RP07333 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.29■□□□□ 0.84
CSF1RP07333 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.29■□□□□ 0.84
CSF1RP07333 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.29■□□□□ 0.84
CSF1RP07333 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 TERF1P3-201ENST00000505638 1227 ntBASIC20.29■□□□□ 0.84
CSF1RP07333 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.29■□□□□ 0.84
CSF1RP07333 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.29■□□□□ 0.84
CSF1RP07333 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CSF1RP07333 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CSF1RP07333 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.29■□□□□ 0.84
CSF1RP07333 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSF1RP07333 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.29■□□□□ 0.84
CSF1RP07333 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.28■□□□□ 0.84
CSF1RP07333 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CSF1RP07333 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 SPDYE17-201ENST00000412399 783 ntBASIC20.28■□□□□ 0.84
CSF1RP07333 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.28■□□□□ 0.84
CSF1RP07333 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 SERBP1P5-201ENST00000510079 1181 ntBASIC20.28■□□□□ 0.84
CSF1RP07333 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.28■□□□□ 0.84
CSF1RP07333 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CSF1RP07333 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CSF1RP07333 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.28■□□□□ 0.84
CSF1RP07333 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
CSF1RP07333 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1RP07333 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSF1RP07333 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms