Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 KRT18P38-201ENST00000449496 1282 ntBASIC18.76■□□□□ 0.59
TPM3P06753 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 AC090616.6-201ENST00000582640 721 ntBASIC18.76■□□□□ 0.59
TPM3P06753 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM3P06753 AC002310.6-201ENST00000624451 1377 ntBASIC18.76■□□□□ 0.59
TPM3P06753 LINC02228-204ENST00000642115 2962 ntBASIC18.76■□□□□ 0.59
TPM3P06753 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM3P06753 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM3P06753 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM3P06753 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM3P06753 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TPM3P06753 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM3P06753 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 AC009533.2-201ENST00000543664 586 ntBASIC18.75■□□□□ 0.59
TPM3P06753 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM3P06753 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 AC005336.2-201ENST00000593183 939 ntBASIC18.75■□□□□ 0.59
TPM3P06753 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM3P06753 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TPM3P06753 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM3P06753 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TPM3P06753 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM3P06753 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM3P06753 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TPM3P06753 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 TERF1P1-201ENST00000311003 1181 ntBASIC18.74■□□□□ 0.59
TPM3P06753 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TPM3P06753 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TPM3P06753 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM3P06753 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM3P06753 HYMAI.1-201ENST00000620949 238 ntBASIC18.74■□□□□ 0.59
TPM3P06753 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TPM3P06753 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM3P06753 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 AP005117.1-202ENST00000581724 1908 ntBASIC18.74■□□□□ 0.59
TPM3P06753 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM3P06753 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms