Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 AL031133.1-201ENST00000406807 723 ntBASIC15.16■□□□□ 0.02
HMGN1P05114 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 PRYP5-201ENST00000451909 266 ntBASIC15.16■□□□□ 0.02
HMGN1P05114 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 TOB2P1-201ENST00000469761 992 ntBASIC15.16■□□□□ 0.02
HMGN1P05114 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.16■□□□□ 0.02
HMGN1P05114 TPSP2-201ENST00000561760 610 ntBASIC15.16■□□□□ 0.02
HMGN1P05114 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.16■□□□□ 0.02
HMGN1P05114 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 AL590326.2-201ENST00000625139 305 ntBASIC15.16■□□□□ 0.02
HMGN1P05114 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HMGN1P05114 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.16■□□□□ 0.02
HMGN1P05114 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.15■□□□□ 0.02
HMGN1P05114 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.15■□□□□ 0.02
HMGN1P05114 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
HMGN1P05114 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.15■□□□□ 0.02
HMGN1P05114 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMGN1P05114 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
HMGN1P05114 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMGN1P05114 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGN1P05114 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
HMGN1P05114 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 LINC00265-3P-201ENST00000447588 903 ntBASIC15.14■□□□□ 0.01
HMGN1P05114 RN7SL850P-201ENST00000579959 291 ntBASIC15.14■□□□□ 0.01
HMGN1P05114 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 AC092329.2-201ENST00000598402 547 ntBASIC15.14■□□□□ 0.01
HMGN1P05114 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms