Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MBD3O95983 REXO1L8P-201ENST00000604378 1897 ntBASIC19.16■□□□□ 0.66
MBD3O95983 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD3O95983 AC004817.3-201ENST00000602957 2129 ntBASIC19.15■□□□□ 0.66
MBD3O95983 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.15■□□□□ 0.66
MBD3O95983 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MBD3O95983 RNF152P1-201ENST00000397754 604 ntBASIC19.15■□□□□ 0.66
MBD3O95983 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD3O95983 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MBD3O95983 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MBD3O95983 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD3O95983 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.15■□□□□ 0.66
MBD3O95983 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3O95983 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MBD3O95983 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MBD3O95983 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MBD3O95983 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MBD3O95983 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MBD3O95983 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.14■□□□□ 0.65
MBD3O95983 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 LINC00982-205ENST00000420957 435 ntBASIC19.14■□□□□ 0.65
MBD3O95983 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD3O95983 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MBD3O95983 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.14■□□□□ 0.65
MBD3O95983 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD3O95983 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 TOP3BP1-201ENST00000420768 1380 ntBASIC19.14■□□□□ 0.65
MBD3O95983 KRT8P39-201ENST00000396270 1433 ntBASIC19.14■□□□□ 0.65
MBD3O95983 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MBD3O95983 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3O95983 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
MBD3O95983 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD3O95983 SPDYE21P-201ENST00000413323 827 ntBASIC19.13■□□□□ 0.65
MBD3O95983 AL645929.1-201ENST00000420084 975 ntBASIC19.13■□□□□ 0.65
MBD3O95983 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 VENTXP7-201ENST00000475503 772 ntBASIC19.13■□□□□ 0.65
MBD3O95983 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.13■□□□□ 0.65
MBD3O95983 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
MBD3O95983 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 AC083849.1-201ENST00000615227 514 ntBASIC19.13■□□□□ 0.65
MBD3O95983 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MBD3O95983 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.13■□□□□ 0.65
MBD3O95983 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD3O95983 LINC01144-201ENST00000626198 1710 ntBASIC19.13■□□□□ 0.65
MBD3O95983 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MBD3O95983 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3O95983 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3O95983 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3O95983 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MBD3O95983 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms