Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRIOO75962 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIOO75962 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIOO75962 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIOO75962 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.68■□□□□ 0.26
TRIOO75962 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIOO75962 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 AC093525.9-201ENST00000624961 1746 ntBASIC16.68■□□□□ 0.26
TRIOO75962 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIOO75962 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIOO75962 SPCS2P2-201ENST00000603270 608 ntBASIC16.68■□□□□ 0.26
TRIOO75962 AC106872.11-201ENST00000605838 421 ntBASIC16.68■□□□□ 0.26
TRIOO75962 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIOO75962 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIOO75962 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.68■□□□□ 0.26
TRIOO75962 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRIOO75962 AL133373.2-201ENST00000623187 2828 ntBASIC16.67■□□□□ 0.26
TRIOO75962 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
TRIOO75962 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIOO75962 AC253536.4-201ENST00000440539 267 ntBASIC16.67■□□□□ 0.26
TRIOO75962 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIOO75962 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIOO75962 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIOO75962 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIOO75962 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIOO75962 AC015967.2-201ENST00000624092 234 ntBASIC16.67■□□□□ 0.26
TRIOO75962 AC006435.4-201ENST00000625037 234 ntBASIC16.67■□□□□ 0.26
TRIOO75962 AL356737.1-201ENST00000634391 234 ntBASIC16.67■□□□□ 0.26
TRIOO75962 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.67■□□□□ 0.26
TRIOO75962 PCDHB17P-201ENST00000539533 2393 ntBASIC16.67■□□□□ 0.26
TRIOO75962 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 TOP3BP1-201ENST00000420768 1380 ntBASIC16.67■□□□□ 0.26
TRIOO75962 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIOO75962 BTBD6P1-201ENST00000412176 1267 ntBASIC16.67■□□□□ 0.26
TRIOO75962 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIOO75962 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIOO75962 RN7SL560P-201ENST00000577943 264 ntBASIC16.67■□□□□ 0.26
TRIOO75962 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIOO75962 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIOO75962 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIOO75962 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIOO75962 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIOO75962 KRT8P22-201ENST00000562317 1415 ntBASIC16.66■□□□□ 0.26
TRIOO75962 SERBP1P3-201ENST00000459980 809 ntBASIC16.66■□□□□ 0.26
TRIOO75962 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIOO75962 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIOO75962 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 AL589702.1-201ENST00000641229 1509 ntBASIC16.66■□□□□ 0.26
TRIOO75962 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIOO75962 FAM86HP-204ENST00000513466 959 ntBASIC16.66■□□□□ 0.26
TRIOO75962 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIOO75962 AP001258.2-201ENST00000529891 490 ntBASIC16.66■□□□□ 0.26
TRIOO75962 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIOO75962 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIOO75962 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIOO75962 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIOO75962 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms