Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC106886.4-201ENST00000623557 2502 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
TRIM3O75382 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRIM3O75382 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 IGLL3P-201ENST00000412472 434 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM3O75382 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 KRT18P2-201ENST00000447938 1258 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.6■□□□□ 0.09
TRIM3O75382 EGFEM1P-202ENST00000431685 1563 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 AC026691.1-201ENST00000602502 2017 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 AC093525.9-201ENST00000624961 1746 ntBASIC15.6■□□□□ 0.09
TRIM3O75382 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM3O75382 AC087163.2-201ENST00000457299 853 ntBASIC15.59■□□□□ 0.09
TRIM3O75382 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 AC022188.1-201ENST00000620960 1664 ntBASIC15.59■□□□□ 0.09
TRIM3O75382 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM3O75382 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRIM3O75382 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM3O75382 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM3O75382 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TRIM3O75382 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM3O75382 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
TRIM3O75382 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM3O75382 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.58■□□□□ 0.08
TRIM3O75382 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms