Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.77■□□□□ 0.12
PLOD3O60568 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.77■□□□□ 0.11
PLOD3O60568 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PLOD3O60568 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PLOD3O60568 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PLOD3O60568 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.77■□□□□ 0.11
PLOD3O60568 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PLOD3O60568 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PLOD3O60568 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.76■□□□□ 0.11
PLOD3O60568 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.76■□□□□ 0.11
PLOD3O60568 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 MIR4492-201ENST00000581627 80 ntBASIC15.76■□□□□ 0.11
PLOD3O60568 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PLOD3O60568 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PLOD3O60568 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PLOD3O60568 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.75■□□□□ 0.11
PLOD3O60568 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.75■□□□□ 0.11
PLOD3O60568 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.75■□□□□ 0.11
PLOD3O60568 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.75■□□□□ 0.11
PLOD3O60568 IGHV3-22-201ENST00000520721 359 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 OR7E47P-204ENST00000575924 449 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 AC005412.3-201ENST00000580309 715 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.75■□□□□ 0.11
PLOD3O60568 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.75■□□□□ 0.11
PLOD3O60568 AC010654.1-201ENST00000615722 808 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 AC004790.2-201ENST00000623588 572 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.75■□□□□ 0.11
PLOD3O60568 AL353732.1-201ENST00000569618 1459 ntBASIC15.75■□□□□ 0.11
PLOD3O60568 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PLOD3O60568 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms