Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.55■□□□□ 0.88
SMARCA5O60264 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCA5O60264 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SMARCA5O60264 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.55■□□□□ 0.88
SMARCA5O60264 AL645728.2-201ENST00000641974 660 ntBASIC20.55■□□□□ 0.88
SMARCA5O60264 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCA5O60264 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCA5O60264 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCA5O60264 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMARCA5O60264 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCA5O60264 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCA5O60264 RNA5SP416-201ENST00000516838 111 ntBASIC20.54■□□□□ 0.88
SMARCA5O60264 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCA5O60264 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.54■□□□□ 0.88
SMARCA5O60264 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 FAM197Y3-203ENST00000618346 717 ntBASIC20.54■□□□□ 0.88
SMARCA5O60264 AC007064.4-201ENST00000637740 555 ntBASIC20.54■□□□□ 0.88
SMARCA5O60264 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMARCA5O60264 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCA5O60264 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMARCA5O60264 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCA5O60264 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.53■□□□□ 0.88
SMARCA5O60264 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCA5O60264 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCA5O60264 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMARCA5O60264 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCA5O60264 PGAM5P1-201ENST00000518923 814 ntBASIC20.53■□□□□ 0.88
SMARCA5O60264 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCA5O60264 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCA5O60264 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCA5O60264 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMARCA5O60264 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCA5O60264 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
SMARCA5O60264 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCA5O60264 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCA5O60264 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCA5O60264 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCA5O60264 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCA5O60264 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms