Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNQ3O43525 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNQ3O43525 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ3O43525 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ3O43525 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNQ3O43525 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KCNQ3O43525 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KCNQ3O43525 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KCNQ3O43525 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KCNQ3O43525 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNQ3O43525 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 AC190387.1-201ENST00000551683 408 ntBASIC21.2■□□□□ 0.98
KCNQ3O43525 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.2■□□□□ 0.98
KCNQ3O43525 AL589739.1-201ENST00000607720 493 ntBASIC21.2■□□□□ 0.98
KCNQ3O43525 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KCNQ3O43525 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
KCNQ3O43525 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNQ3O43525 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.19■□□□□ 0.98
KCNQ3O43525 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.19■□□□□ 0.98
KCNQ3O43525 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNQ3O43525 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 AL353705.2-201ENST00000428243 662 ntBASIC21.19■□□□□ 0.98
KCNQ3O43525 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.19■□□□□ 0.98
KCNQ3O43525 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNQ3O43525 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 AC239800.4-201ENST00000603712 296 ntBASIC21.19■□□□□ 0.98
KCNQ3O43525 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
KCNQ3O43525 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.19■□□□□ 0.98
KCNQ3O43525 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 AC006538.1-201ENST00000567905 1585 ntBASIC21.19■□□□□ 0.98
KCNQ3O43525 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KCNQ3O43525 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNQ3O43525 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNQ3O43525 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 AL080243.2-201ENST00000418783 582 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
KCNQ3O43525 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNQ3O43525 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 AL079307.3-201ENST00000556114 283 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
KCNQ3O43525 AC061975.2-201ENST00000581722 295 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 AC004790.1-201ENST00000612686 536 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 AC004840.1-201ENST00000636359 365 ntBASIC21.18■□□□□ 0.98
KCNQ3O43525 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNQ3O43525 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNQ3O43525 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KCNQ3O43525 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KCNQ3O43525 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.17■□□□□ 0.98
KCNQ3O43525 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.17■□□□□ 0.98
KCNQ3O43525 SPTLC1P1-201ENST00000447199 261 ntBASIC21.17■□□□□ 0.98
KCNQ3O43525 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.17■□□□□ 0.98
KCNQ3O43525 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.17■□□□□ 0.98
KCNQ3O43525 AL035456.1-201ENST00000456064 1369 ntBASIC21.17■□□□□ 0.98
KCNQ3O43525 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.17■□□□□ 0.98
KCNQ3O43525 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms