Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FOXN1O15353 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXN1O15353 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN1O15353 AC020907.1-201ENST00000616460 1350 ntBASIC19.83■□□□□ 0.77
FOXN1O15353 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN1O15353 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN1O15353 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 MYCLP1-201ENST00000372451 1075 ntBASIC19.83■□□□□ 0.77
FOXN1O15353 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXN1O15353 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXN1O15353 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXN1O15353 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXN1O15353 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXN1O15353 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXN1O15353 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN1O15353 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN1O15353 AC009407.1-201ENST00000568958 598 ntBASIC19.83■□□□□ 0.77
FOXN1O15353 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.83■□□□□ 0.77
FOXN1O15353 AC244093.1-201ENST00000610837 814 ntBASIC19.83■□□□□ 0.77
FOXN1O15353 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN1O15353 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FOXN1O15353 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN1O15353 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXN1O15353 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
FOXN1O15353 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXN1O15353 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXN1O15353 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXN1O15353 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXN1O15353 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 AL590787.1-201ENST00000568856 1315 ntBASIC19.82■□□□□ 0.76
FOXN1O15353 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 AC234783.1-201ENST00000441761 496 ntBASIC19.82■□□□□ 0.76
FOXN1O15353 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXN1O15353 AC103810.3-201ENST00000583567 96 ntBASIC19.82■□□□□ 0.76
FOXN1O15353 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.82■□□□□ 0.76
FOXN1O15353 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
FOXN1O15353 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXN1O15353 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXN1O15353 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
FOXN1O15353 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FOXN1O15353 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXN1O15353 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms