Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN5O00501 UXT-AS1-201ENST00000590504 1525 ntBASIC17.54■□□□□ 0.4
CLDN5O00501 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN5O00501 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN5O00501 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN5O00501 AC023141.5-201ENST00000458585 616 ntBASIC17.54■□□□□ 0.4
CLDN5O00501 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLDN5O00501 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN5O00501 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN5O00501 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.54■□□□□ 0.4
CLDN5O00501 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLDN5O00501 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN5O00501 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN5O00501 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN5O00501 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN5O00501 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN5O00501 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN5O00501 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 TSEN15P1-201ENST00000423257 515 ntBASIC17.53■□□□□ 0.4
CLDN5O00501 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN5O00501 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 IGHV3-62-201ENST00000520057 340 ntBASIC17.53■□□□□ 0.4
CLDN5O00501 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN5O00501 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN5O00501 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 NKILA-202ENST00000614771 2598 ntBASIC17.53■□□□□ 0.4
CLDN5O00501 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN5O00501 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN5O00501 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN5O00501 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN5O00501 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN5O00501 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN5O00501 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CLDN5O00501 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.52■□□□□ 0.4
CLDN5O00501 PMS2P2-201ENST00000425039 1128 ntBASIC17.52■□□□□ 0.4
CLDN5O00501 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN5O00501 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN5O00501 AC109322.1-201ENST00000524499 1264 ntBASIC17.52■□□□□ 0.4
CLDN5O00501 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN5O00501 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN5O00501 AC093028.1-201ENST00000622998 982 ntBASIC17.52■□□□□ 0.4
CLDN5O00501 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN5O00501 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CLDN5O00501 GPAA1P2-202ENST00000606848 1787 ntBASIC17.52■□□□□ 0.4
CLDN5O00501 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLDN5O00501 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN5O00501 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CLDN5O00501 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN5O00501 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLDN5O00501 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN5O00501 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN5O00501 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CLDN5O00501 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN5O00501 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN5O00501 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms