Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.78■□□□□ 0.44
O00370 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
O00370 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.78■□□□□ 0.44
O00370 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
O00370 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
O00370 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
O00370 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.78■□□□□ 0.44
O00370 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.78■□□□□ 0.44
O00370 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
O00370 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 AC092364.2-201ENST00000596710 2692 ntBASIC17.77■□□□□ 0.44
O00370 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
O00370 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
O00370 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
O00370 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.77■□□□□ 0.44
O00370 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.77■□□□□ 0.44
O00370 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
O00370 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.77■□□□□ 0.44
O00370 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 HLA-J-202ENST00000469281 1241 ntBASIC17.77■□□□□ 0.44
O00370 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.77■□□□□ 0.44
O00370 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
O00370 PDPK2P-202ENST00000562415 1191 ntBASIC17.77■□□□□ 0.44
O00370 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.77■□□□□ 0.44
O00370 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.77■□□□□ 0.44
O00370 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
O00370 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
O00370 AC006538.1-201ENST00000567905 1585 ntBASIC17.77■□□□□ 0.44
O00370 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
O00370 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
O00370 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
O00370 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
O00370 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.77■□□□□ 0.43
O00370 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
O00370 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
O00370 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.77■□□□□ 0.43
O00370 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
O00370 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
O00370 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
O00370 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 KRT8P39-201ENST00000396270 1433 ntBASIC17.76■□□□□ 0.43
O00370 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.76■□□□□ 0.43
O00370 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.76■□□□□ 0.43
O00370 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
O00370 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.76■□□□□ 0.43
O00370 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.76■□□□□ 0.43
O00370 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.76■□□□□ 0.43
O00370 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.76■□□□□ 0.43
O00370 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.76■□□□□ 0.43
O00370 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.76■□□□□ 0.43
O00370 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
O00370 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
O00370 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.76■□□□□ 0.43
O00370 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
O00370 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.76■□□□□ 0.43
O00370 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
O00370 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
O00370 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.75■□□□□ 0.43
O00370 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms