Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.08■□□□□ 0.16
SLC28A1O00337 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC28A1O00337 PMS2P1-201ENST00000431037 1228 ntBASIC16.08■□□□□ 0.16
SLC28A1O00337 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC28A1O00337 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC28A1O00337 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A1O00337 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A1O00337 CYP2A7P1-201ENST00000595391 815 ntBASIC16.08■□□□□ 0.16
SLC28A1O00337 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A1O00337 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC28A1O00337 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
SLC28A1O00337 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A1O00337 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A1O00337 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A1O00337 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A1O00337 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC28A1O00337 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A1O00337 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC28A1O00337 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC28A1O00337 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC28A1O00337 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC087641.1-201ENST00000557561 1021 ntBASIC16.07■□□□□ 0.16
SLC28A1O00337 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC28A1O00337 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC28A1O00337 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC107918.4-202ENST00000641623 219 ntBASIC16.07■□□□□ 0.16
SLC28A1O00337 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC28A1O00337 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC28A1O00337 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC28A1O00337 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC28A1O00337 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A1O00337 LINC01144-201ENST00000626198 1710 ntBASIC16.07■□□□□ 0.16
SLC28A1O00337 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A1O00337 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A1O00337 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A1O00337 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 AL596087.1-201ENST00000400979 1969 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A1O00337 SLC22A20-204ENST00000530038 1673 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A1O00337 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 AC129492.6-201ENST00000611383 1305 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A1O00337 AKR1C7P-201ENST00000305623 895 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC28A1O00337 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A1O00337 POU5F1P6-201ENST00000466990 990 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 RPS15P9-201ENST00000494093 319 ntBASIC16.06■□□□□ 0.16
SLC28A1O00337 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms