Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 BTBD6P1-201ENST00000412176 1267 ntBASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 RPL13AP20-201ENST00000459725 609 ntBASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AC104596.2-201ENST00000512793 793 ntBASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 RRP7BP-205ENST00000566851 833 ntBASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AC009542.2-202ENST00000619004 1067 ntBASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
C1QTNF9BB2RNN3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.52■□□□□ 0.07
C1QTNF9BB2RNN3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 RPL7P3-201ENST00000441388 714 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AP001889.1-201ENST00000525414 633 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 MIR4706-201ENST00000582134 82 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 FLJ13224-201ENST00000313737 1514 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 LTB4R2-202ENST00000528054 3092 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AL390961.4-201ENST00000623958 2535 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 AC131009.4-201ENST00000624048 1740 ntBASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.51■□□□□ 0.07
C1QTNF9BB2RNN3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 NOC2LP1-202ENST00000452600 2235 ntBASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF9BB2RNN3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms