Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRIT2A6NDA9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AC020765.3-201ENST00000613051 740 ntBASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRIT2A6NDA9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC124067.4-201ENST00000519691 2379 ntBASIC15.82■□□□□ 0.12
LRIT2A6NDA9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC002347.1-201ENST00000569543 541 ntBASIC15.82■□□□□ 0.12
LRIT2A6NDA9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRIT2A6NDA9 AC005052.1-201ENST00000625181 2492 ntBASIC15.82■□□□□ 0.12
LRIT2A6NDA9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.81■□□□□ 0.12
LRIT2A6NDA9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms