Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 AP005482.1-201ENST00000563722 1273 ntBASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL606495.2-201ENST00000605867 535 ntBASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 MIR6775-201ENST00000617557 69 ntBASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL139011.1-202ENST00000642063 584 ntBASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC234783.1-201ENST00000441761 496 ntBASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC008735.3-201ENST00000596646 500 ntBASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM261P1-201ENST00000604899 340 ntBASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LOC102724428A0A0B4J2F2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 KRT223P-202ENST00000449164 1292 ntBASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC092552.1-201ENST00000547243 906 ntBASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 RRP7BP-205ENST00000566851 833 ntBASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC020765.3-201ENST00000613051 740 ntBASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 REXO1L6P-201ENST00000603433 1515 ntBASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.93■□□□□ 0.94
LOC102724428A0A0B4J2F2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL139010.1-201ENST00000454878 894 ntBASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 AL391256.1-201ENST00000443260 1855 ntBASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LOC102724428A0A0B4J2F2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms