Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AL133373.2-201ENST00000623187 2828 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 SLC7A15P-201ENST00000424028 1363 ntBASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 AC112492.5-201ENST00000421897 457 ntBASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC2Q9Y5Z7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 RPS2P32-201ENST00000439199 892 ntBASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 SERBP1P3-201ENST00000459980 809 ntBASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC106886.1-201ENST00000568660 600 ntBASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 MIR6805-201ENST00000615055 62 ntBASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC2Q9Y5Z7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HCFC2Q9Y5Z7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 AC055876.2-201ENST00000531834 546 ntBASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 KRT17P8-201ENST00000540749 863 ntBASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HCFC2Q9Y5Z7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms