Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 AC008677.1-201ENST00000519230 1561 ntBASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SPDYE14P-201ENST00000442619 822 ntBASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTDP1Q9Y5B0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AL133373.2-201ENST00000623187 2828 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC055876.3-201ENST00000431496 288 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC051619.7-201ENST00000568314 623 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC138649.4-201ENST00000612222 287 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC084121.4-201ENST00000641598 221 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AF228730.8-201ENST00000642140 221 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 AC092053.1-201ENST00000605787 1936 ntBASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTDP1Q9Y5B0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTDP1Q9Y5B0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms