Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SCARNA2-201ENST00000458748 420 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 AF238378.1-201ENST00000526806 358 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 IFNL4P1-201ENST00000607083 540 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 AL589182.2-201ENST00000619332 1049 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TUBB8P12-201ENST00000308911 1335 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TUBB7P-202ENST00000428444 1305 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 TUBB8P7-204ENST00000567960 1332 ntBASIC14.66□□□□□ -0.06
RHBDD3Q9Y3P4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 AP002490.2-201ENST00000524791 560 ntBASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 AL139424.1-201ENST00000607572 797 ntBASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RHBDD3Q9Y3P4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RHBDD3Q9Y3P4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.65□□□□□ -0.07
RHBDD3Q9Y3P4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RHBDD3Q9Y3P4 AC243591.1-201ENST00000452967 1364 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms