Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 SPDYE17-201ENST00000412399 783 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 AL080243.2-201ENST00000418783 582 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 AC009477.1-201ENST00000452936 217 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 TSPY16P-201ENST00000449843 468 ntBASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 AL079307.3-201ENST00000556114 283 ntBASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 AL589739.1-201ENST00000607720 493 ntBASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SYNPO2Q9UMS6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPO2Q9UMS6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPO2Q9UMS6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPO2Q9UMS6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPO2Q9UMS6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 MRPS18AP1-201ENST00000414458 589 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AC002472.2-201ENST00000442739 958 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 UGT1A2P-201ENST00000454886 866 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 RN7SL204P-201ENST00000582831 262 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 AC022144.1-201ENST00000602255 1580 ntBASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPO2Q9UMS6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms