Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC092865.6-201ENST00000642101 219 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC012569.1-201ENST00000591191 1524 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC025580.3-201ENST00000617932 1424 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 HMGA1P7-201ENST00000406908 502 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AC023274.1-201ENST00000418278 595 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 HCG4-201ENST00000418983 998 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 KRT19P2-202ENST00000557173 1012 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 AC023141.13-201ENST00000604991 943 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 NFIC-211ENST00000641145 8399 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 HLA-A-202ENST00000376806 1854 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 OR6D1P-203ENST00000641209 4860 ntBASIC16.16■□□□□ 0.18
CUEDC1Q9NWM3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 METTL21AP1-201ENST00000438852 635 ntBASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 AC007064.4-201ENST00000637740 555 ntBASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms