Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC008608.2-201ENST00000606089 416 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 PCDHA1-201ENST00000378133 2726 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 LINC02199-201ENST00000506655 2702 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 LINC00895-201ENST00000629028 1637 ntBASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.93□□□□□ -0.18
LIN7CQ9NUP9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 MTHFR-217ENST00000641820 1569 ntBASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 AKR1C7P-201ENST00000305623 895 ntBASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 UNC93B7-201ENST00000509439 705 ntBASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 AL355877.3-201ENST00000622820 899 ntBASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 AL139288.1-201ENST00000623748 933 ntBASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LIN7CQ9NUP9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 CICP6-201ENST00000457191 2729 ntBASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms