Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 RNF216P1-203ENST00000404404 2427 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 AP3S2-216ENST00000617003 1561 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 AL031731.1-201ENST00000642131 2094 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 FO538757.1-201ENST00000623083 1397 ntBASIC17.93■□□□□ 0.46
NXF3Q9H4D5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AC055876.3-201ENST00000431496 288 ntBASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AC140878.1-201ENST00000565277 250 ntBASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AL096865.1-201ENST00000606796 927 ntBASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AC138649.4-201ENST00000612222 287 ntBASIC17.93■□□□□ 0.46
NXF3Q9H4D5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NXF3Q9H4D5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 GGT4P-201ENST00000623672 1708 ntBASIC17.92■□□□□ 0.46
NXF3Q9H4D5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NXF3Q9H4D5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NXF3Q9H4D5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms